NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 4e858066b56a
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 4e/5f2352
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/5f23522f2ba26afa9b87a87542b702
Native ID: nf-4e5f23522f2ba26afa9b87a87542b702-eceeb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 4
Memory (peak / alloc): 3.3 GB / 10.0 GB
Process I/O (rchar / wchar): 640.4 MB / 18.2 MB
Disk I/O (read / write): - / 15.3 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:53:08 AM
Completed: Jan 26, 2026 4:54:15 AM
Total Duration: 1m 6s

Phases

Queue: 2s
Execution: 1m 1s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 06/e6ca1d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/e6ca1dbcca3543fea5fcb1120b2241
Native ID: nf-06e6ca1dbcca3543fea5fcb1120b2241-699c2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.6 / 4
Memory (peak / alloc): 3.4 GB / 10.0 GB
Process I/O (rchar / wchar): 313.0 MB / 4.2 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:18:04 AM
Completed: Jan 26, 2026 3:18:47 AM
Total Duration: 42s

Phases

Queue: 3s
Execution: 36s
Stage/Unstage: 3s