NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975)

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Task Info

Status: succeeded
Hash: 54ea99934844
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 68/5b1104
Exit Code: -
Container: community.wave.seqera.io/library/sentieon:202308.03--b599c8ad694846bd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/5b1104949206fec8a37f409609f835
Native ID: nf-685b1104949206fec8a37f409609f835-efd13

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.9 / 6
Memory (peak / alloc): 1018.9 MB / 36.0 GB
Process I/O (rchar / wchar): 8.3 GB / 1.2 MB
Disk I/O (read / write): 140.5 MB / 62.2 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:34:50 AM
Completed: Jan 26, 2026 4:36:58 AM
Total Duration: 2m 7s

Phases

Queue: 4s
Execution: 1m 1s
Stage/Unstage: 1m 1s

Attempt 2

Execution

Status: succeeded - cached
Hash: a9/3d37a2
Exit Code: -
Container: community.wave.seqera.io/library/sentieon:202308.03--b599c8ad694846bd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/3d37a292177073e6b25cfe3c078c7a
Native ID: nf-a93d37a292177073e6b25cfe3c078c7a-2fd0f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.4 / 6
Memory (peak / alloc): 364.0 MB / 36.0 GB
Process I/O (rchar / wchar): 2.4 GB / 432.0 KB
Disk I/O (read / write): - / 31.9 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:02:46 AM
Completed: Jan 26, 2026 12:05:24 AM
Total Duration: 2m 37s

Phases

Queue: 1m 22s
Execution: 13s
Stage/Unstage: 1m 1s

Attempt 1

Execution

Status: succeeded
Hash: 89/ec13d3
Exit Code: -
Container: community.wave.seqera.io/library/sentieon:202308.03--b599c8ad694846bd
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/ec13d3f774f06f745be99b8d320450
Native ID: nf-89ec13d3f774f06f745be99b8d320450-db4f7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.4 / 6
Memory (peak / alloc): 399.9 MB / 36.0 GB
Process I/O (rchar / wchar): 2.4 GB / 432.0 KB
Disk I/O (read / write): - / 31.9 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:36:34 PM
Completed: Jan 25, 2026 10:39:07 PM
Total Duration: 2m 32s

Phases

Queue: 1m 21s
Execution: 12s
Stage/Unstage: 58s