NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 5dc25a269cf5
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 2f/bc3700
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/bc37006533756448f8fa5077c957f9
Native ID: nf-2fbc37006533756448f8fa5077c957f9-38f0e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.7 / 2
Memory (peak / alloc): 101.1 MB / 12.0 GB
Process I/O (rchar / wchar): 42.4 MB / 8.2 MB
Disk I/O (read / write): - / 8.2 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:52:18 AM
Completed: Jan 26, 2026 4:52:26 AM
Total Duration: 7s

Phases

Queue: 3s
Execution: 2s
Stage/Unstage: 1s

Attempt 3

Execution

Status: succeeded
Hash: 60/8b78e8
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/8b78e8c0fb5eceafac9e621e9ed7b8
Native ID: nf-608b78e8c0fb5eceafac9e621e9ed7b8-cf84c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.7 / 2
Memory (peak / alloc): 101.7 MB / 12.0 GB
Process I/O (rchar / wchar): 42.9 MB / 8.7 MB
Disk I/O (read / write): - / 8.7 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:25:21 AM
Completed: Jan 26, 2026 2:27:03 AM
Total Duration: 1m 41s

Phases

Queue: 1m 35s
Execution: 2s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 7e/59ae39
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/59ae39dd388270fb62187431e68de8
Native ID: nf-7e59ae39dd388270fb62187431e68de8-e130b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.1 / 2
Memory (peak / alloc): 102.2 MB / 12.0 GB
Process I/O (rchar / wchar): 42.9 MB / 8.7 MB
Disk I/O (read / write): - / 8.7 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 1:01:55 AM
Completed: Jan 26, 2026 1:02:04 AM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: 0b/3c0d24
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/3c0d24fc2514b0a2b075f4bfce2c55
Native ID: nf-0b3c0d24fc2514b0a2b075f4bfce2c55-13664

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.7 / 2
Memory (peak / alloc): 101.8 MB / 12.0 GB
Process I/O (rchar / wchar): 42.9 MB / 8.7 MB
Disk I/O (read / write): 32.7 MB / 8.7 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:33:53 PM
Completed: Jan 25, 2026 11:34:02 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 1s