NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

Login

Task Info

Status: succeeded
Hash: 5ea30654d0f2
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 05/23b144
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/23b144172d0be22730aa7588985a80
Native ID: nf-0523b144172d0be22730aa7588985a80-8ebbd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.3 MB / 2.0 GB
Process I/O (rchar / wchar): 156.3 KB / 12.7 KB
Disk I/O (read / write): - / 16.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:34:59 AM
Completed: Jan 26, 2026 4:35:40 AM
Total Duration: 40s

Phases

Queue: 38s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: f4/e3c8a7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/e3c8a7b776a85a4214b6db494dd2d7
Native ID: nf-f4e3c8a7b776a85a4214b6db494dd2d7-58799

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.2 MB / 2.0 GB
Process I/O (rchar / wchar): 124.0 KB / 7.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:05 AM
Completed: Jan 26, 2026 2:27:13 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: a4/5dd899
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/5dd8991e95634df148af3d0aafeceb
Native ID: nf-a45dd8991e95634df148af3d0aafeceb-f66c1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 9.6 MB / 1.0 GB
Process I/O (rchar / wchar): 954.8 KB / 144.8 KB
Disk I/O (read / write): - / 148.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:12:54 AM
Completed: Jan 26, 2026 12:12:59 AM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 41/2c80db
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/2c80dbec1dfb8c69ef3583de43dfa4
Native ID: nf-412c80dbec1dfb8c69ef3583de43dfa4-08cd1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.8 / 1
Memory (peak / alloc): 9.8 MB / 1.0 GB
Process I/O (rchar / wchar): 954.6 KB / 144.8 KB
Disk I/O (read / write): - / 148.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:46:22 PM
Completed: Jan 25, 2026 10:46:28 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -