NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 6400bc118dc0
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 07/04b080
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/04b080d7a04720229367337e05bbd3
Native ID: nf-0704b080d7a04720229367337e05bbd3-61aac

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.0 / 2
Memory (peak / alloc): 101.1 MB / 12.0 GB
Process I/O (rchar / wchar): 38.5 MB / 4.9 MB
Disk I/O (read / write): - / 4.9 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:43:19 AM
Completed: Jan 26, 2026 4:43:31 AM
Total Duration: 11s

Phases

Queue: 8s
Execution: 2s
Stage/Unstage: 0s

Attempt 3

Execution

Status: succeeded
Hash: 0d/af07ae
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/af07aee91c1dedb1302bfe8b9df449
Native ID: nf-0daf07aee91c1dedb1302bfe8b9df449-c274b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.3 / 2
Memory (peak / alloc): 102.0 MB / 12.0 GB
Process I/O (rchar / wchar): 38.6 MB / 4.9 MB
Disk I/O (read / write): - / 4.9 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:25:20 AM
Completed: Jan 26, 2026 2:27:02 AM
Total Duration: 1m 41s

Phases

Queue: 1m 36s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: d5/092b72
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/092b723cbbbadbcb32cff19d1a8db8
Native ID: nf-d5092b723cbbbadbcb32cff19d1a8db8-451cd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 35.0 / 2
Memory (peak / alloc): 14.0 MB / 12.0 GB
Process I/O (rchar / wchar): 32.9 MB / 224.2 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:14:54 AM
Completed: Jan 26, 2026 12:15:00 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: 5b/81cb77
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/81cb77b23cd171c8d05882c40fe6fd
Native ID: nf-5b81cb77b23cd171c8d05882c40fe6fd-aa631

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 34.7 / 2
Memory (peak / alloc): 13.9 MB / 12.0 GB
Process I/O (rchar / wchar): 32.9 MB / 224.2 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:48:32 PM
Completed: Jan 25, 2026 10:48:39 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: 1s
Stage/Unstage: 0s