NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
BCFTOOLS_ANNOTATE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 6c00ebeb5cf5
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 5d/042639
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/04263990fdce8a0ff56ec9523ed61c
Native ID: nf-5d04263990fdce8a0ff56ec9523ed61c-3dff6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 2
Memory (peak / alloc): 289.6 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 32.1 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:35:14 AM
Completed: Jan 26, 2026 4:35:54 AM
Total Duration: 39s

Phases

Queue: 35s
Execution: 2s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 6d/2c9537
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/2c953714c4a6a31e79b59f6ed02947
Native ID: nf-6d2c953714c4a6a31e79b59f6ed02947-32292

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.3 / 2
Memory (peak / alloc): 226.4 MB / 12.0 GB
Process I/O (rchar / wchar): 41.8 MB / 1.7 MB
Disk I/O (read / write): - / 1.8 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:27 AM
Completed: Jan 26, 2026 2:27:38 AM
Total Duration: 10s

Phases

Queue: 5s
Execution: 2s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 41/17cf1a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/17cf1af67c593ce14aa2efc1a0fa03
Native ID: nf-4117cf1af67c593ce14aa2efc1a0fa03-1a586

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.3 / 2
Memory (peak / alloc): 253.0 MB / 12.0 GB
Process I/O (rchar / wchar): 41.8 MB / 1.7 MB
Disk I/O (read / write): - / 1.7 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 1:02:26 AM
Completed: Jan 26, 2026 1:02:34 AM
Total Duration: 7s

Phases

Queue: 3s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 8a/47e327
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/47e327a556a720dd99f701e0d902b3
Native ID: nf-8a47e327a556a720dd99f701e0d902b3-38c7b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 13.5 / 2
Memory (peak / alloc): 287.3 MB / 12.0 GB
Process I/O (rchar / wchar): 41.8 MB / 1.7 MB
Disk I/O (read / write): - / 1.8 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:34:24 PM
Completed: Jan 25, 2026 11:34:32 PM
Total Duration: 7s

Phases

Queue: 3s
Execution: 2s
Stage/Unstage: 2s