NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 70a75b8bdacd
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 98/f90587
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/f905873d855d31c2481622cde03742
Native ID: nf-98f905873d855d31c2481622cde03742-09967

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 217.3 MB / 100.0 GB
Process I/O (rchar / wchar): 138.2 MB / 1.3 MB
Disk I/O (read / write): - / 88.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:19:24 AM
Completed: Jan 26, 2026 3:19:42 AM
Total Duration: 17s

Phases

Queue: 3s
Execution: 4s
Stage/Unstage: 10s

Attempt 3

Execution

Status: succeeded
Hash: 9c/f94098
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/f94098a42c36584438376c5b7bde1a
Native ID: nf-9cf94098a42c36584438376c5b7bde1a-790c3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.2 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.0 GB / 97.4 MB
Disk I/O (read / write): - / 7.5 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:45 AM
Completed: Jan 26, 2026 2:31:14 AM
Total Duration: 1m 28s

Phases

Queue: 15s
Execution: 43s
Stage/Unstage: 30s

Attempt 2

Execution

Status: succeeded
Hash: d6/5a3e8f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/5a3e8f8e7040ac90aa62ac61ff3609
Native ID: nf-d65a3e8f8e7040ac90aa62ac61ff3609-3928d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 6
Memory (peak / alloc): 402.4 MB / 100.0 GB
Process I/O (rchar / wchar): 587.4 MB / 6.2 MB
Disk I/O (read / write): - / 352.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:16:54 AM
Completed: Jan 26, 2026 12:17:24 AM
Total Duration: 29s

Phases

Queue: 3s
Execution: 16s
Stage/Unstage: 10s

Attempt 1

Execution

Status: succeeded
Hash: b8/3f504f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/3f504f88a48f2945cfca7cd253493e
Native ID: nf-b83f504f88a48f2945cfca7cd253493e-5685c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 6
Memory (peak / alloc): 402.6 MB / 100.0 GB
Process I/O (rchar / wchar): 587.4 MB / 6.2 MB
Disk I/O (read / write): - / 344.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:50:13 PM
Completed: Jan 25, 2026 10:50:42 PM
Total Duration: 28s

Phases

Queue: 2s
Execution: 16s
Stage/Unstage: 10s