NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 7a9d9dbb7fcc
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: f8/2f7a72
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/2f7a72fa532b8ad7b4ea3e4975690b
Native ID: nf-f82f7a72fa532b8ad7b4ea3e4975690b-f04db

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.3 / 4
Memory (peak / alloc): 3.5 GB / 10.0 GB
Process I/O (rchar / wchar): 642.3 MB / 26.7 MB
Disk I/O (read / write): - / 23.8 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:03:23 AM
Completed: Jan 26, 2026 3:04:38 AM
Total Duration: 1m 14s

Phases

Queue: 3s
Execution: 1m 8s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 3b/5fe9d4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/5fe9d41f3378a1bab3e9baf52d075e
Native ID: nf-3b5fe9d41f3378a1bab3e9baf52d075e-c2b64

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 3.5 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.6 MB
Disk I/O (read / write): - / 16.2 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:28:24 AM
Completed: Jan 26, 2026 2:29:35 AM
Total Duration: 1m 10s

Phases

Queue: 4s
Execution: 1m 3s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 7d/af605f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/af605f8891f5ee1304bb4295a522af
Native ID: nf-7daf605f8891f5ee1304bb4295a522af-c6932

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 4.1 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.2 MB
Disk I/O (read / write): - / 15.3 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:37:04 AM
Completed: Jan 26, 2026 12:38:12 AM
Total Duration: 1m 7s

Phases

Queue: 3s
Execution: 1m 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: ab/a5d56b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/a5d56bccc538e301c2b5b2dd42e676
Native ID: nf-aba5d56bccc538e301c2b5b2dd42e676-18762

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 4
Memory (peak / alloc): 3.4 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.2 MB
Disk I/O (read / write): - / 15.3 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:10:52 PM
Completed: Jan 25, 2026 11:11:59 PM
Total Duration: 1m 6s

Phases

Queue: 2s
Execution: 1m 1s
Stage/Unstage: 3s