NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 7c2aac553958
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: fc/2d25eb
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/2d25eb35be188a284160d91c5fbabe
Native ID: nf-fc2d25eb35be188a284160d91c5fbabe-19d04

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 36.2 / 2
Memory (peak / alloc): 13.8 MB / 12.0 GB
Process I/O (rchar / wchar): 31.3 MB / 377.5 KB
Disk I/O (read / write): - / 388.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:34:33 AM
Completed: Jan 26, 2026 4:34:39 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 1s

Attempt 3

Execution

Status: succeeded
Hash: b1/7b2b1a
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/7b2b1a74ef992c640b6f7d3e000158
Native ID: nf-b17b2b1a74ef992c640b6f7d3e000158-75dee

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 27.9 / 2
Memory (peak / alloc): 13.8 MB / 12.0 GB
Process I/O (rchar / wchar): 31.3 MB / 377.5 KB
Disk I/O (read / write): - / 388.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:25:20 AM
Completed: Jan 26, 2026 2:27:00 AM
Total Duration: 1m 39s

Phases

Queue: 1m 36s
Execution: 1s
Stage/Unstage: 1s

Attempt 2

Execution

Status: succeeded
Hash: f5/dd45b2
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/dd45b2f714d400af2525640ce1a452
Native ID: nf-f5dd45b2f714d400af2525640ce1a452-373e9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 37.8 / 2
Memory (peak / alloc): 14.1 MB / 12.0 GB
Process I/O (rchar / wchar): 31.3 MB / 377.5 KB
Disk I/O (read / write): - / 388.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:14:24 AM
Completed: Jan 26, 2026 12:14:30 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: 40/b0f1b5
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/b0f1b5a3a148887d20ab1a484a39e5
Native ID: nf-40b0f1b5a3a148887d20ab1a484a39e5-5b96b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 37.7 / 2
Memory (peak / alloc): 13.7 MB / 12.0 GB
Process I/O (rchar / wchar): 31.3 MB / 377.6 KB
Disk I/O (read / write): - / 388.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:47:42 PM
Completed: Jan 25, 2026 10:47:49 PM
Total Duration: 6s

Phases

Queue: 3s
Execution: 0s
Stage/Unstage: 2s