NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 8cdf79a75f3b
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 94/1d9217
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/1d9217e6f0b80a4667bf8cad95cb1c
Native ID: nf-941d9217e6f0b80a4667bf8cad95cb1c-2317e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.6 / 2
Memory (peak / alloc): 296.3 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 34.2 KB
Disk I/O (read / write): - / 52.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:17:24 AM
Completed: Jan 26, 2026 3:17:32 AM
Total Duration: 7s

Phases

Queue: 4s
Execution: 1s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 6b/7cea34
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/7cea34401832978aff16c9b7dd962a
Native ID: nf-6b7cea34401832978aff16c9b7dd962a-d402c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.9 / 2
Memory (peak / alloc): 292.6 MB / 12.0 GB
Process I/O (rchar / wchar): 39.1 MB / 218.4 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:04 AM
Completed: Jan 26, 2026 2:27:15 AM
Total Duration: 10s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 4s

Attempt 2

Execution

Status: succeeded
Hash: 49/cb71ed
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/cb71edd9494b6e43aff04dec8d6e45
Native ID: nf-49cb71edd9494b6e43aff04dec8d6e45-2dea1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.3 / 2
Memory (peak / alloc): 296.1 MB / 12.0 GB
Process I/O (rchar / wchar): 40.5 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:13:05 AM
Completed: Jan 26, 2026 12:13:14 AM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 05/d1bf00
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/05/d1bf00060456e3bff7a06ee002b770
Native ID: nf-05d1bf00060456e3bff7a06ee002b770-318e7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 14.4 / 2
Memory (peak / alloc): 306.3 MB / 12.0 GB
Process I/O (rchar / wchar): 40.5 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:46:33 PM
Completed: Jan 25, 2026 10:46:42 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s