NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 91bca8ef4150
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 26/f81ba7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/f81ba729c29cf45a4f7d7c16a4623c
Native ID: nf-26f81ba729c29cf45a4f7d7c16a4623c-7af1c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 3.9 GB / 10.0 GB
Process I/O (rchar / wchar): 641.2 MB / 7.1 MB
Disk I/O (read / write): - / 4.4 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:28:04 AM
Completed: Jan 26, 2026 2:29:24 AM
Total Duration: 1m 19s

Phases

Queue: 12s
Execution: 1m 5s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 97/ccbd89
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/ccbd89e1db11c9492ff65089b63fb2
Native ID: nf-97ccbd89e1db11c9492ff65089b63fb2-126b5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 4
Memory (peak / alloc): 3.8 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.2 MB
Disk I/O (read / write): - / 16.1 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:28:05 AM
Completed: Jan 26, 2026 2:29:22 AM
Total Duration: 1m 16s

Phases

Queue: 11s
Execution: 1m 3s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 01/a41b09
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/a41b099df65f6888d94c5ef0d14604
Native ID: nf-01a41b099df65f6888d94c5ef0d14604-aded6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 4
Memory (peak / alloc): 3.4 GB / 10.0 GB
Process I/O (rchar / wchar): 553.7 MB / 3.6 MB
Disk I/O (read / write): - / 744.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:16:04 AM
Completed: Jan 26, 2026 12:17:03 AM
Total Duration: 58s

Phases

Queue: 3s
Execution: 53s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 3a/313b20
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/313b20d4f502db68be2f1206fb62ac
Native ID: nf-3a313b20d4f502db68be2f1206fb62ac-22b48

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 3.5 GB / 10.0 GB
Process I/O (rchar / wchar): 553.7 MB / 3.6 MB
Disk I/O (read / write): - / 732.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:49:32 PM
Completed: Jan 25, 2026 10:50:31 PM
Total Duration: 58s

Phases

Queue: 3s
Execution: 52s
Stage/Unstage: 3s