NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 950af4e0d500
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 1b/ce3d8e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/ce3d8e9f1afeb5d0b3f8c3e9e5dd61
Native ID: nf-1bce3d8e9f1afeb5d0b3f8c3e9e5dd61-a29fa

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 4
Memory (peak / alloc): 3.0 GB / 10.0 GB
Process I/O (rchar / wchar): 639.8 MB / 15.2 MB
Disk I/O (read / write): - / 12.3 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:44:19 AM
Completed: Jan 26, 2026 4:45:33 AM
Total Duration: 1m 13s

Phases

Queue: 8s
Execution: 1m 2s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: f8/2f7a72
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/2f7a72fa532b8ad7b4ea3e4975690b
Native ID: nf-f82f7a72fa532b8ad7b4ea3e4975690b-f04db

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.3 / 4
Memory (peak / alloc): 3.5 GB / 10.0 GB
Process I/O (rchar / wchar): 642.3 MB / 26.7 MB
Disk I/O (read / write): - / 23.8 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:03:23 AM
Completed: Jan 26, 2026 3:04:38 AM
Total Duration: 1m 14s

Phases

Queue: 3s
Execution: 1m 8s
Stage/Unstage: 3s