NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 9a3e210e59fd
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 6b/7cea34
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/7cea34401832978aff16c9b7dd962a
Native ID: nf-6b7cea34401832978aff16c9b7dd962a-d402c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.9 / 2
Memory (peak / alloc): 292.6 MB / 12.0 GB
Process I/O (rchar / wchar): 39.1 MB / 218.4 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:04 AM
Completed: Jan 26, 2026 2:27:15 AM
Total Duration: 10s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 4s

Attempt 3

Execution

Status: succeeded
Hash: dc/f9fa8c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/f9fa8ce1ca6cb06c7aa6a96fb37fac
Native ID: nf-dcf9fa8ce1ca6cb06c7aa6a96fb37fac-d0665

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.0 / 2
Memory (peak / alloc): 294.6 MB / 12.0 GB
Process I/O (rchar / wchar): 38.9 MB / 71.5 KB
Disk I/O (read / write): - / 88.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:26 AM
Completed: Jan 26, 2026 2:27:47 AM
Total Duration: 20s

Phases

Queue: 16s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 03/e83076
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/e830760bec4ff33e493b2e350895e4
Native ID: nf-03e830760bec4ff33e493b2e350895e4-2b012

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.9 / 2
Memory (peak / alloc): 290.9 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 32.2 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:15:15 AM
Completed: Jan 26, 2026 12:15:37 AM
Total Duration: 21s

Phases

Queue: 18s
Execution: 1s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: a6/ff22ae
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/ff22ae503e0892b56fbcf6e2ee50f8
Native ID: nf-a6ff22ae503e0892b56fbcf6e2ee50f8-cbdb3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.4 / 2
Memory (peak / alloc): 307.4 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 32.2 KB
Disk I/O (read / write): - / 52.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:48:53 PM
Completed: Jan 25, 2026 10:49:00 PM
Total Duration: 6s

Phases

Queue: 3s
Execution: 2s
Stage/Unstage: 1s