NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 9b2c0a1169b3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 25/ec901d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/ec901dba8265ed532ae6e9337cbda9
Native ID: nf-25ec901dba8265ed532ae6e9337cbda9-1f83f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.3 / 2
Memory (peak / alloc): 319.4 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 26.9 KB
Disk I/O (read / write): - / 40.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:17:25 AM
Completed: Jan 26, 2026 3:17:32 AM
Total Duration: 6s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 2c/e4d966
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/e4d966ce5f1e062384fcd392407e81
Native ID: nf-2ce4d966ce5f1e062384fcd392407e81-01d54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.4 / 2
Memory (peak / alloc): 280.1 MB / 12.0 GB
Process I/O (rchar / wchar): 38.8 MB / 32.2 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:25 AM
Completed: Jan 26, 2026 2:27:48 AM
Total Duration: 22s

Phases

Queue: 17s
Execution: 2s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 7b/2aef9f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/2aef9fa6d15aeaf378d2240dd0bfe2
Native ID: nf-7b2aef9fa6d15aeaf378d2240dd0bfe2-6627f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.4 / 2
Memory (peak / alloc): 298.3 MB / 12.0 GB
Process I/O (rchar / wchar): 38.9 MB / 71.5 KB
Disk I/O (read / write): - / 88.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:14:45 AM
Completed: Jan 26, 2026 12:14:52 AM
Total Duration: 6s

Phases

Queue: 2s
Execution: 1s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: e3/ee5962
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/ee5962fc9b35564c65feb7c1b90883
Native ID: nf-e3ee5962fc9b35564c65feb7c1b90883-bc37f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 13.2 / 2
Memory (peak / alloc): 299.1 MB / 12.0 GB
Process I/O (rchar / wchar): 38.9 MB / 71.5 KB
Disk I/O (read / write): - / 88.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:48:03 PM
Completed: Jan 25, 2026 10:48:10 PM
Total Duration: 6s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 2s