NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 9c1d0635ef96
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: cc/ac864a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/ac864ac0e3ba4d4b14a4871abbf19e
Native ID: nf-ccac864ac0e3ba4d4b14a4871abbf19e-59250

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 4
Memory (peak / alloc): 3.8 GB / 10.0 GB
Process I/O (rchar / wchar): 553.7 MB / 3.6 MB
Disk I/O (read / write): - / 716.0 KB
Host: i-055117647fd43cf56 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:36:32 AM
Completed: Jan 26, 2026 4:37:43 AM
Total Duration: 1m 10s

Phases

Queue: 13s
Execution: 55s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 0e/1c6886
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/1c68869d6f7bd47ba2a5f0fc5115db
Native ID: nf-0e1c68869d6f7bd47ba2a5f0fc5115db-9640f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 4
Memory (peak / alloc): 3.6 GB / 10.0 GB
Process I/O (rchar / wchar): 553.8 MB / 3.6 MB
Disk I/O (read / write): - / 776.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:28:24 AM
Completed: Jan 26, 2026 2:29:25 AM
Total Duration: 1m 0s

Phases

Queue: 4s
Execution: 53s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: bf/2c5bd2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/2c5bd2b1b2b1f1b59feccaddf4464c
Native ID: nf-bf2c5bd2b1b2b1f1b59feccaddf4464c-a69c9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 4
Memory (peak / alloc): 3.9 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.6 MB
Disk I/O (read / write): - / 15.8 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 1:02:55 AM
Completed: Jan 26, 2026 1:04:07 AM
Total Duration: 1m 11s

Phases

Queue: 3s
Execution: 1m 5s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 77/49e0f1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/49e0f1ca297ac8bfdccf8f528738b6
Native ID: nf-7749e0f1ca297ac8bfdccf8f528738b6-c8b3c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 3.7 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.6 MB
Disk I/O (read / write): 13.4 MB / 15.8 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:34:53 PM
Completed: Jan 25, 2026 11:36:07 PM
Total Duration: 1m 13s

Phases

Queue: 3s
Execution: 1m 7s
Stage/Unstage: 3s