|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr1_69091-70008)
|
7m 44s |
1m 40s |
4m 26s |
1m 38s |
1.5 GB |
210% |
2.4 GB |
1.2 MB |
2.0 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr17_40792427-40792569)
|
8m 9s |
1m 38s |
5m 3s |
1m 28s |
1.2 GB |
221% |
2.3 GB |
1.2 MB |
8.9 MB |
1.2 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr19_38395480-38396145)
|
6m 2s |
3s |
4m 36s |
1m 23s |
1.4 GB |
213% |
2.3 GB |
1.2 MB |
322.8 MB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr2_218692583-218692710)
|
6m 56s |
4s |
5m 43s |
1m 9s |
1.2 GB |
224% |
2.7 GB |
1.2 MB |
2.5 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr22_46658187-46658307)
|
4m 6s |
1m 30s |
1m 25s |
1m 11s |
997.8 MB |
225% |
1.1 GB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr4_40123127-40123212)
|
7m 17s |
1m 37s |
4m 26s |
1m 14s |
1.1 GB |
207% |
2.5 GB |
1.2 MB |
464.1 MB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr6_29355230-29356195)
|
9m 16s |
1m 37s |
6m 19s |
1m 20s |
1.4 GB |
245% |
2.8 GB |
1.2 MB |
463.6 MB |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr7_117777511-117777765)
|
9m 47s |
1m 37s |
6m 24s |
1m 46s |
1.2 GB |
234% |
2.9 GB |
1.2 MB |
507.9 MB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr9_114918096-114918138)
|
8m 36s |
1m 36s |
5m 11s |
1m 49s |
1.2 GB |
227% |
2.4 GB |
1.2 MB |
442.6 MB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
9s |
2s |
4s |
3s |
455.3 MB |
344% |
98.0 MB |
2.4 MB |
0 bytes |
2.4 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8s |
2s |
4s |
2s |
485.2 MB |
350% |
100.7 MB |
2.4 MB |
0 bytes |
2.4 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr11_63291540-63291643)
|
2m 14s |
4s |
57s |
1m 12s |
689.3 MB |
590% |
7.2 GB |
1.2 MB |
284.4 MB |
65.9 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr1_204140035-204140118)
|
3m 45s |
1m 34s |
43s |
1m 27s |
576.2 MB |
584% |
6.7 GB |
1.1 MB |
456.7 MB |
64.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr12_122813270-122813419)
|
2m 3s |
4s |
40s |
1m 18s |
512.2 MB |
582% |
6.0 GB |
1.1 MB |
367.6 MB |
64.8 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975)
|
2m 7s |
4s |
1m 1s |
1m 1s |
1018.9 MB |
593% |
8.3 GB |
1.2 MB |
140.5 MB |
62.2 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr1_69091-70008)
|
1m 50s |
4s |
42s |
1m 3s |
507.9 MB |
586% |
6.8 GB |
1.2 MB |
2.2 GB |
67.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr17_40792427-40792569)
|
3m 56s |
1m 35s |
55s |
1m 25s |
516.9 MB |
588% |
7.1 GB |
1.3 MB |
80.5 MB |
63.0 MB |
3 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr19_38395480-38396145)
|
3m 53s |
1m 34s |
48s |
1m 30s |
660.9 MB |
586% |
6.7 GB |
1.3 MB |
6.1 MB |
61.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr2_218692583-218692710)
|
3m 36s |
1m 31s |
51s |
1m 13s |
685.7 MB |
589% |
7.1 GB |
1.2 MB |
351.5 MB |
63.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr22_46658187-46658307)
|
1m 35s |
4s |
11s |
1m 19s |
387.8 MB |
534% |
2.4 GB |
432.0 KB |
174.1 MB |
31.8 MB |
1 |