NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: a817a01ffadb
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 97/834fb4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/834fb4cf35c40289f23a3493a73d2c
Native ID: nf-97834fb4cf35c40289f23a3493a73d2c-c3276

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 3.3 MB / 2.0 GB
Process I/O (rchar / wchar): 126.1 KB / 7.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:35:00 AM
Completed: Jan 26, 2026 4:35:08 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: d5/50a9cc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/50a9cce534675599913dfe7e0651c5
Native ID: nf-d550a9cce534675599913dfe7e0651c5-8d381

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 3.1 MB / 2.0 GB
Process I/O (rchar / wchar): 154.2 KB / 12.7 KB
Disk I/O (read / write): - / 16.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:05 AM
Completed: Jan 26, 2026 2:27:13 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 87/1df211
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/1df2111d4eafae5ad4ca391c4b9d8a
Native ID: nf-871df2111d4eafae5ad4ca391c4b9d8a-bb081

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 155.1 KB / 12.7 KB
Disk I/O (read / write): - / 16.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:14:34 AM
Completed: Jan 26, 2026 12:14:39 AM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 4a/498eb2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/498eb263daab2158483f8d32e65c74
Native ID: nf-4a498eb263daab2158483f8d32e65c74-71cab

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 154.9 KB / 12.7 KB
Disk I/O (read / write): - / 16.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:47:52 PM
Completed: Jan 25, 2026 10:47:57 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -