NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: aa0233f83fd1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 40/c40454
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/c40454ff1f742ee49d6afa15c20ecf
Native ID: nf-40c40454ff1f742ee49d6afa15c20ecf-bfd23

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 6
Memory (peak / alloc): 616.9 MB / 100.0 GB
Process I/O (rchar / wchar): 789.3 MB / 14.2 MB
Disk I/O (read / write): - / 816.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:44 AM
Completed: Jan 26, 2026 2:30:54 AM
Total Duration: 1m 9s

Phases

Queue: 16s
Execution: 24s
Stage/Unstage: 29s

Attempt 3

Execution

Status: succeeded
Hash: 66/a28baa
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/a28baae1cb1f5f4fffce299a7b7f89
Native ID: nf-66a28baae1cb1f5f4fffce299a7b7f89-d9d70

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.2 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 109.4 MB
Disk I/O (read / write): - / 8.4 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:46 AM
Completed: Jan 26, 2026 2:31:12 AM
Total Duration: 1m 25s

Phases

Queue: 14s
Execution: 43s
Stage/Unstage: 28s

Attempt 2

Execution

Status: succeeded
Hash: 5d/9cf49a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/9cf49afae89d57108ed96c2a3895bc
Native ID: nf-5d9cf49afae89d57108ed96c2a3895bc-50973

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 215.9 MB / 100.0 GB
Process I/O (rchar / wchar): 147.1 MB / 1.3 MB
Disk I/O (read / write): - / 92.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:17:24 AM
Completed: Jan 26, 2026 12:17:42 AM
Total Duration: 17s

Phases

Queue: 3s
Execution: 5s
Stage/Unstage: 9s

Attempt 1

Execution

Status: succeeded
Hash: c6/12b8f8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/12b8f81d9bddb59e7f113b02750d8d
Native ID: nf-c612b8f81d9bddb59e7f113b02750d8d-d32e5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 192.3 MB / 100.0 GB
Process I/O (rchar / wchar): 147.1 MB / 1.3 MB
Disk I/O (read / write): - / 88.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:50:52 PM
Completed: Jan 25, 2026 10:51:10 PM
Total Duration: 17s

Phases

Queue: 3s
Execution: 4s
Stage/Unstage: 10s