NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
CNV_FACETS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: ac020252d3db
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: e2/442870
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/facets:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/442870acaf6cde32ee3283706b60ee
Native ID: nf-e2442870acaf6cde32ee3283706b60ee-4097e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 6
Memory (peak / alloc): 6.6 GB / 36.0 GB
Process I/O (rchar / wchar): 860.1 GB / 704.5 GB
Disk I/O (read / write): 157.4 GB / 2.7 GB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:34:32 AM
Completed: Jan 26, 2026 5:11:36 AM
Total Duration: 37m 3s

Phases

Queue: 2s
Execution: 31m 48s
Stage/Unstage: 5m 12s

Attempt 3

Execution

Status: succeeded
Hash: aa/fad112
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/facets:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/fad112fa212077e86dae7e1408d42a
Native ID: nf-aafad112fa212077e86dae7e1408d42a-95e76

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 6
Memory (peak / alloc): 6.6 GB / 36.0 GB
Process I/O (rchar / wchar): 860.1 GB / 704.5 GB
Disk I/O (read / write): 157.3 GB / 2.7 GB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:25:18 AM
Completed: Jan 26, 2026 3:05:55 AM
Total Duration: 40m 36s

Phases

Queue: 2m 5s
Execution: 33m 16s
Stage/Unstage: 5m 14s

Attempt 2

Execution

Status: aborted
Hash: 36/e2ec0f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/facets:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/e2ec0f1026d99c2b3378474178bf06
Native ID: nf-36e2ec0f1026d99c2b3378474178bf06-1142a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:52:56 AM
Completed: Jan 26, 2026 1:14:27 AM
Total Duration: -

Phases

Queue: 1m 38s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: aborted
Hash: c2/03a3d6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/facets:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/03a3d6d03897f88802c3d3097126f4
Native ID: nf-c203a3d6d03897f88802c3d3097126f4-dd6c9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:25:24 PM
Completed: Jan 25, 2026 11:41:05 PM
Total Duration: -

Phases

Queue: 1m 58s
Execution: -
Stage/Unstage: -