NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: bc2b3a6a20f3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: a6/725941
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/725941764de542fe9cfb5e5a3811cb
Native ID: nf-a6725941764de542fe9cfb5e5a3811cb-8c9c3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 4
Memory (peak / alloc): 3.1 GB / 10.0 GB
Process I/O (rchar / wchar): 639.1 MB / 4.5 MB
Disk I/O (read / write): 64.7 MB / 1.8 MB
Host: i-00fb8408a6c37d92b ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:36:32 AM
Completed: Jan 26, 2026 4:38:03 AM
Total Duration: 1m 30s

Phases

Queue: 25s
Execution: 1m 2s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 0d/9d5183
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/9d51838cb8cddb9b9eb78c88d58d28
Native ID: nf-0d9d51838cb8cddb9b9eb78c88d58d28-8876c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 4
Memory (peak / alloc): 3.6 GB / 10.0 GB
Process I/O (rchar / wchar): 639.1 MB / 4.5 MB
Disk I/O (read / write): - / 1.7 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:28:25 AM
Completed: Jan 26, 2026 2:29:44 AM
Total Duration: 1m 18s

Phases

Queue: 3s
Execution: 1m 12s
Stage/Unstage: 3s