NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

Login

Task Info

Status: succeeded
Hash: c87a83991012
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: ab/290388
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/290388b165be003aba5d7cd7ed6f0c
Native ID: nf-ab290388b165be003aba5d7cd7ed6f0c-52934

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 238.1 MB / 100.0 GB
Process I/O (rchar / wchar): 88.8 MB / 2.6 MB
Disk I/O (read / write): - / 156.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:19:04 AM
Completed: Jan 26, 2026 3:19:21 AM
Total Duration: 16s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 10s

Attempt 3

Execution

Status: succeeded
Hash: 40/c40454
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/c40454ff1f742ee49d6afa15c20ecf
Native ID: nf-40c40454ff1f742ee49d6afa15c20ecf-bfd23

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 6
Memory (peak / alloc): 616.9 MB / 100.0 GB
Process I/O (rchar / wchar): 789.3 MB / 14.2 MB
Disk I/O (read / write): - / 816.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:44 AM
Completed: Jan 26, 2026 2:30:54 AM
Total Duration: 1m 9s

Phases

Queue: 16s
Execution: 24s
Stage/Unstage: 29s

Attempt 2

Execution

Status: succeeded
Hash: a3/a51c03
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/a51c03a774af321fc49c4361dc8b91
Native ID: nf-a3a51c03a774af321fc49c4361dc8b91-8dd34

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.3 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.0 GB / 97.4 MB
Disk I/O (read / write): - / 7.5 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:15:05 AM
Completed: Jan 26, 2026 12:16:24 AM
Total Duration: 1m 18s

Phases

Queue: 28s
Execution: 39s
Stage/Unstage: 11s

Attempt 1

Execution

Status: succeeded
Hash: 92/4d4dfc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/4d4dfc0416251e218da2f8e37dbbef
Native ID: nf-924d4dfc0416251e218da2f8e37dbbef-9600f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.3 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.0 GB / 97.4 MB
Disk I/O (read / write): - / 7.5 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:48:33 PM
Completed: Jan 25, 2026 10:49:49 PM
Total Duration: 1m 15s

Phases

Queue: 27s
Execution: 39s
Stage/Unstage: 9s