NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
ENSEMBLVEP_VEP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: f1b7875ecdc1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: db/f3084a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/f3084a4e071bd5e6a5b1935a197100
Native ID: nf-dbf3084a4e071bd5e6a5b1935a197100-14ab0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 205.5 MB / 100.0 GB
Process I/O (rchar / wchar): 147.1 MB / 1.3 MB
Disk I/O (read / write): - / 88.0 KB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:38:01 AM
Completed: Jan 26, 2026 4:38:36 AM
Total Duration: 34s

Phases

Queue: 16s
Execution: 6s
Stage/Unstage: 12s

Attempt 3

Execution

Status: succeeded
Hash: 0e/fd1f64
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/fd1f6444cfea73472900b45d4ba2c0
Native ID: nf-0efd1f6444cfea73472900b45d4ba2c0-82ba1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.1 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 110.4 MB
Disk I/O (read / write): - / 8.4 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:54 AM
Completed: Jan 26, 2026 2:31:15 AM
Total Duration: 1m 20s

Phases

Queue: 6s
Execution: 45s
Stage/Unstage: 29s

Attempt 2

Execution

Status: succeeded
Hash: 7c/4ecaf4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/4ecaf40dd63909e4879e963678b673
Native ID: nf-7c4ecaf40dd63909e4879e963678b673-99ba6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.3 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 110.4 MB
Disk I/O (read / write): - / 8.3 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 1:04:25 AM
Completed: Jan 26, 2026 1:05:21 AM
Total Duration: 55s

Phases

Queue: 3s
Execution: 41s
Stage/Unstage: 11s

Attempt 1

Execution

Status: succeeded
Hash: b3/5dfd49
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/5dfd49acee949342cbc0293b518060
Native ID: nf-b35dfd49acee949342cbc0293b518060-965a4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.1 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 110.4 MB
Disk I/O (read / write): 5.4 MB / 8.4 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:36:23 PM
Completed: Jan 25, 2026 11:37:23 PM
Total Duration: 59s

Phases

Queue: 4s
Execution: 45s
Stage/Unstage: 10s