NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30) - sarek-1029_BGFD-variants-3 - Workflow Tracker

Runs
sarek-1029_B..-variants-3
Tasks
CRAM_FILTER_HLA (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)

Login

Task Info

Status: aborted
Hash: 35ba46553da4
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30
Attempts: 2

Attempt 2

Execution

Status: aborted
Hash: e6/991081
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/991081791a3d35182de54ca7e4d4ca
Native ID: nf-e6991081791a3d35182de54ca7e4d4ca-cc0ff

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.9 / 12
Memory (peak / alloc): 1.9 GB / 72.0 GB
Process I/O (rchar / wchar): 136.0 GB / 71.0 GB
Disk I/O (read / write): 4.0 KB / 2.6 GB
Host: i-0f745e43a789b67b1 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:46:57 AM
Completed: Jan 25, 2026 1:08:29 AM
Total Duration: 21m 31s

Phases

Queue: 53s
Execution: 17m 59s
Stage/Unstage: 2m 38s

Attempt 1

Execution

Status: failed
Hash: c0/62eb42
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/62eb424dbd34aa245c9e99a4aaa613
Native ID: nf-c062eb424dbd34aa245c9e99a4aaa613-8ba4e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:42:13 AM
Completed: Jan 25, 2026 12:46:57 AM
Total Duration: 4m 43s

Phases

Queue: 4m 43s
Execution: -
Stage/Unstage: -