NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30) - sarek-1029_BGFD-variants-3 - Workflow Tracker

Runs
sarek-1029_B..-variants-3
Tasks
CONPAIR_PILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)

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Task Info

Status: succeeded
Hash: 635cafd90090
Process: NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 75/8f2aa3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/8f2aa339b41dfb571dae548075feec
Native ID: nf-758f2aa339b41dfb571dae548075feec-08674

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 12
Memory (peak / alloc): 858.4 MB / 72.0 GB
Process I/O (rchar / wchar): 13.3 GB / 193.0 MB
Disk I/O (read / write): - / 193.2 MB
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:45:49 AM
Completed: Jan 25, 2026 12:51:19 AM
Total Duration: 5m 29s

Phases

Queue: 3s
Execution: 2m 53s
Stage/Unstage: 2m 32s

Attempt 1

Execution

Status: failed
Hash: 2a/4dbeda
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/4dbeda4e87e0f6a59566c2f10fbc69
Native ID: nf-2a4dbeda4e87e0f6a59566c2f10fbc69-38a8a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:42:14 AM
Completed: Jan 25, 2026 12:45:46 AM
Total Duration: 3m 31s

Phases

Queue: 1m 5s
Execution: 2m 26s
Stage/Unstage: 0s