|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7m 44s |
2m 38s |
4m 35s |
31s |
473.1 MB |
771% |
121.4 GB |
83.0 MB |
14.9 GB |
79.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
21m 31s |
1m 9s |
19m 3s |
1m 19s |
1.7 GB |
216% |
5.6 GB |
1.6 MB |
10.8 MB |
1.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
19m 51s |
1m 8s |
17m 29s |
1m 14s |
1.3 GB |
215% |
6.2 GB |
1.6 MB |
1.4 GB |
1.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
3m 17s |
1m 8s |
1m 15s |
54s |
1011.9 MB |
250% |
745.7 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
27m 53s |
1m 8s |
25m 27s |
1m 18s |
1.4 GB |
220% |
6.4 GB |
1.7 MB |
10.0 MB |
1.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8s |
2s |
4s |
2s |
218.1 MB |
372% |
97.5 MB |
2.4 MB |
0 bytes |
2.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
9s |
3s |
4s |
2s |
481.7 MB |
361% |
100.2 MB |
2.4 MB |
0 bytes |
2.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
6m 17s |
1m 0s |
3m 59s |
1m 17s |
750.2 MB |
601% |
15.3 GB |
4.7 MB |
7.4 MB |
250.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
2m 22s |
1m 1s |
9s |
1m 11s |
321.6 MB |
544% |
1.3 GB |
433.0 KB |
4.0 KB |
31.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
4m 42s |
1m 1s |
2m 47s |
53s |
557.6 MB |
605% |
14.4 GB |
4.5 MB |
883.8 MB |
259.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
5m 28s |
1m 4s |
3m 5s |
1m 18s |
877.7 MB |
600% |
15.3 GB |
4.7 MB |
6.2 MB |
251.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
25s |
18s |
4s |
3s |
336.1 MB |
401% |
96.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
29s |
18s |
8s |
3s |
522.8 MB |
258% |
115.5 MB |
23.5 MB |
0 bytes |
23.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
4m 46s |
34s |
3m 4s |
1m 8s |
679.6 MB |
746% |
9.7 GB |
103.3 MB |
3.6 GB |
69.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
1m 25s |
6s |
48s |
31s |
558.9 MB |
238% |
1.1 GB |
9.9 MB |
143.0 MB |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
5m 15s |
33s |
3m 33s |
1m 9s |
665.0 MB |
565% |
8.5 GB |
99.1 MB |
564.3 MB |
65.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
3m 28s |
35s |
2m 18s |
35s |
647.4 MB |
760% |
9.8 GB |
92.7 MB |
5.1 GB |
65.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_TIDDIT:TABIX_BGZIP_TIDDIT_SV (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8s |
7s |
- |
- |
3.3 MB |
98% |
507.1 KB |
76.1 KB |
0 bytes |
80.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_TIDDIT:TIDDIT_SV (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
6m 41s |
48s |
5m 18s |
35s |
8.1 GB |
262% |
36.7 GB |
2.1 GB |
0 bytes |
605.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
1m 11s |
31s |
30s |
9s |
1.9 GB |
711% |
2.0 GB |
29.0 MB |
0 bytes |
22.7 MB |
1 |