|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
3m 27s |
18s |
2m 33s |
36s |
1.4 GB |
118% |
2.0 GB |
2.6 MB |
0 bytes |
2.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
4s |
3s |
- |
- |
3.3 MB |
50% |
159.9 KB |
12.8 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7s |
6s |
- |
- |
3.3 MB |
78% |
121.6 KB |
7.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7s |
6s |
- |
- |
9.7 MB |
119% |
1.1 MB |
144.7 KB |
0 bytes |
148.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7s |
5s |
- |
- |
9.4 MB |
120% |
1.8 MB |
152.1 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
3s |
2s |
- |
- |
10.0 MB |
108% |
1.8 MB |
152.2 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
14s |
13s |
0s |
0s |
3.6 MB |
1098% |
150.9 KB |
1.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
9s |
7s |
0s |
1s |
34.1 MB |
7345% |
2.0 MB |
44.9 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
9s |
7s |
0s |
1s |
3.7 MB |
3286% |
194.6 KB |
721 bytes |
0 bytes |
4.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8s |
7s |
0s |
0s |
20.4 MB |
1396% |
1.2 MB |
39.0 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
9s |
7s |
0s |
1s |
3.6 MB |
2354% |
2.0 MB |
43.9 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
18s |
14s |
2s |
1s |
100.5 MB |
436% |
38.5 MB |
4.9 MB |
0 bytes |
4.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
11s |
9s |
1s |
0s |
14.1 MB |
2127% |
31.2 MB |
377.5 KB |
0 bytes |
388.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
11s |
7s |
2s |
1s |
100.3 MB |
438% |
42.7 MB |
8.7 MB |
0 bytes |
8.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
11s |
8s |
1s |
1s |
27.6 MB |
2391% |
32.3 MB |
223.2 KB |
0 bytes |
232.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7s |
3s |
2s |
1s |
102.0 MB |
1420% |
42.5 MB |
8.2 MB |
0 bytes |
8.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
2m 32s |
7s |
1m 36s |
49s |
478.4 MB |
100% |
17.8 GB |
5.3 MB |
17.1 GB |
5.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
1m 56s |
3s |
1m 23s |
30s |
480.0 MB |
100% |
18.6 GB |
11.7 MB |
18.0 GB |
11.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
1m 59s |
2s |
1m 24s |
33s |
480.9 MB |
100% |
18.6 GB |
13.9 MB |
18.0 GB |
13.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
2m 18s |
5s |
1m 39s |
34s |
480.1 MB |
100% |
18.6 GB |
12.7 MB |
18.0 GB |
12.7 MB |
1 |