|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8m 1s |
1m 8s |
5m 57s |
56s |
613.0 MB |
106% |
5.1 GB |
1.2 MB |
5.0 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8m 45s |
1m 8s |
6m 29s |
1m 8s |
686.9 MB |
106% |
4.8 GB |
1.2 MB |
775.9 MB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8m 30s |
1m 9s |
6m 28s |
53s |
1.0 GB |
106% |
5.3 GB |
1.2 MB |
1.1 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)
|
25m 33s |
1m 7s |
21m 34s |
2m 52s |
1.0 GB |
103% |
21.9 GB |
1.2 MB |
21.5 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)
|
5m 41s |
1m 8s |
1m 42s |
2m 51s |
642.8 MB |
112% |
2.0 GB |
735.5 KB |
139.0 MB |
748.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)
|
26m 35s |
1m 9s |
22m 39s |
2m 47s |
1.0 GB |
103% |
23.2 GB |
1.3 MB |
23.2 GB |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)
|
25m 35s |
1m 9s |
21m 14s |
3m 12s |
1.0 GB |
103% |
21.9 GB |
1.2 MB |
21.9 GB |
1.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:LEARNREADORIENTATIONMODEL (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
12m 0s |
3s |
11m 54s |
3s |
3.3 GB |
110% |
335.2 MB |
176.9 MB |
0 bytes |
177.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MERGE_MUTECT2 (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
8s |
2s |
3s |
3s |
216.9 MB |
336% |
97.4 MB |
2.3 MB |
0 bytes |
2.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MERGEMUTECTSTATS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
7s |
2s |
2s |
3s |
292.5 MB |
257% |
95.0 MB |
691.5 KB |
0 bytes |
696.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
2h 38m |
1m 7s |
2h 34m |
3m 15s |
6.0 GB |
126% |
28.4 GB |
81.9 MB |
5.3 GB |
81.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
3h 1m |
1m 7s |
2h 57m |
2m 57s |
5.0 GB |
133% |
31.1 GB |
80.3 MB |
27.1 GB |
80.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
2h 32m |
1m 7s |
2h 28m |
2m 52s |
5.3 GB |
124% |
30.0 GB |
76.0 MB |
26.7 GB |
76.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
16m 37s |
1m 7s |
12m 6s |
3m 24s |
1.5 GB |
134% |
2.9 GB |
7.6 MB |
636.9 MB |
7.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
18s |
13s |
3s |
2s |
222.3 MB |
299% |
96.1 MB |
914.1 KB |
0 bytes |
916.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
18s |
13s |
3s |
2s |
220.3 MB |
354% |
96.7 MB |
1.7 MB |
0 bytes |
1.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
11m 5s |
3s |
8m 34s |
2m 28s |
1.2 GB |
876% |
33.9 GB |
5.9 MB |
26.2 GB |
13.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
4m 19s |
3s |
1m 49s |
2m 27s |
977.3 MB |
367% |
3.2 GB |
2.2 MB |
532.2 MB |
3.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
17m 18s |
2s |
14m 50s |
2m 26s |
1.1 GB |
667% |
35.1 GB |
6.0 MB |
28.1 GB |
13.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)
|
12m 20s |
3s |
9m 49s |
2m 28s |
1.1 GB |
757% |
32.6 GB |
5.7 MB |
25.3 GB |
11.9 MB |
1 |