NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30) - sarek-1029_BGFD-variants-3 - Workflow Tracker

Runs
sarek-1029_B..-variants-3
Tasks
SAMTOOLS_STATS (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)

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Task Info

Status: succeeded
Hash: b23014f213a0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 62/a7a9d1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/a7a9d11dfd0730aab1d8fd9badff51
Native ID: nf-62a7a9d11dfd0730aab1d8fd9badff51-bebc1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.3 MB / 12.0 GB
Process I/O (rchar / wchar): 66.0 GB / 170.3 KB
Disk I/O (read / write): 66.0 GB / 172.0 KB
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:45:48 AM
Completed: Jan 25, 2026 1:08:58 AM
Total Duration: 23m 9s

Phases

Queue: 3s
Execution: 20m 31s
Stage/Unstage: 2m 35s

Attempt 1

Execution

Status: failed
Hash: 32/9fbf38
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/9fbf38cad8ec35f47303d3d7cdee3f
Native ID: nf-329fbf38cad8ec35f47303d3d7cdee3f-b651d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:42:12 AM
Completed: Jan 25, 2026 12:45:43 AM
Total Duration: 3m 30s

Phases

Queue: 49s
Execution: 2m 41s
Stage/Unstage: 0s