NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30) - sarek-1029_BGFD-variants-3 - Workflow Tracker

Runs
sarek-1029_B..-variants-3
Tasks
BCFTOOLS_MPILEUP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30)

Login

Task Info

Status: succeeded
Hash: fe37491d293e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 36/2fc7cc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/2fc7cc58152ce1ad7bbcb109c42fdf
Native ID: nf-362fc7cc58152ce1ad7bbcb109c42fdf-77dd9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 12
Memory (peak / alloc): 577.1 MB / 72.0 GB
Process I/O (rchar / wchar): 71.9 GB / 12.4 MB
Disk I/O (read / write): - / 1.2 MB
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:45:47 AM
Completed: Jan 25, 2026 12:55:32 AM
Total Duration: 9m 44s

Phases

Queue: 4s
Execution: 7m 4s
Stage/Unstage: 2m 36s

Attempt 1

Execution

Status: failed
Hash: b1/78d566
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/78d5666cbfcd5bec8fc6b9c7eface1
Native ID: nf-b178d5666cbfcd5bec8fc6b9c7eface1-8a093

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0b2b709b1bd288ae9 ( on-demand)

Runtime

Submitted: Jan 25, 2026 12:42:11 AM
Completed: Jan 25, 2026 12:45:23 AM
Total Duration: 3m 11s

Phases

Queue: 48s
Execution: 2m 23s
Stage/Unstage: 0s