Prefix: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0034/tools__44c19e3d--20260605-212233
| Path | ||
|---|---|---|
| /reports/raw_qc/snpeff/sentieon_haplotyper_rf/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.deconflicted_germline_custom.ann_snpEff.genes.txt | Jun 05, 2026 4:22 PM | |
| /annotation/sentieon_haplotyper_rf/869_VZQ-N1-BDNA-1_A23FG3YLT4_1/869_VZQ-N1-BDNA-1_A23FG3YLT4_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:22 PM | |
| /reports/raw_qc/snpeff/sentieon_haplotyper_rf/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.deconflicted_germline_custom.ann_snpEff.csv | Jun 05, 2026 4:22 PM | |
| /reports/EnsemblVEP/sentieon_haplotyper_rf/1136_7L-N1-BDNA-1_A237CFYLT3_1/1136_7L-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff_VEP.ann.summary.html | Jun 05, 2026 4:22 PM | |
| /reports/EnsemblVEP/sentieon_haplotyper_rf/1136_814-N1-BDNA-1_A237CFYLT3_1/1136_814-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff_VEP.ann.summary.html | Jun 05, 2026 4:22 PM | |
| /variant_calling/hrd/TiH/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/FACETS/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.gene_level.txt | Jun 05, 2026 4:21 PM | |
| /variant_calling/hrd/TiH/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/FACETS/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1_hisens_diplogR.adjusted.seg | Jun 05, 2026 4:21 PM | |
| /variant_calling/hrd/TiH/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/FACETS/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1_hisens.segments.txt | Jun 05, 2026 4:21 PM | |
| /variant_calling/hrd/TiH/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/FACETS/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.gene_level_purity.txt | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_7OO-N1-BDNA-1_A237CFYLT3_1/1136_7OO-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/869_XTN-N1-BDNA-1_A23FG3YLT4_1/869_XTN-N1-BDNA-1_A23FG3YLT4_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_7OO-N1-BDNA-1_A237CFYLT3_1/1136_7OO-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/869_XTN-N1-BDNA-1_A23FG3YLT4_1/869_XTN-N1-BDNA-1_A23FG3YLT4_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_5BE-N1-BDNA-1_A237CFYLT3_1/1136_5BE-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz | Jun 05, 2026 4:21 PM | |
| /reports/raw_qc/snpeff/sentieon_haplotyper_rf/869_XA6-N1-BDNA-1_A23FG3YLT4_1/869_XA6-N1-BDNA-1_A23FG3YLT4_1.deconflicted_germline_custom.ann_snpEff.genes.txt | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_5BE-N1-BDNA-1_A237CFYLT3_1/1136_5BE-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_814-N1-BDNA-1_A237CFYLT3_1/1136_814-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:21 PM | |
| /reports/raw_qc/snpeff/sentieon_haplotyper_rf/869_XA6-N1-BDNA-1_A23FG3YLT4_1/snpEff_summary.html | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_7L-N1-BDNA-1_A237CFYLT3_1/1136_7L-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz.tbi | Jun 05, 2026 4:21 PM | |
| /annotation/sentieon_haplotyper_rf/1136_7L-N1-BDNA-1_A237CFYLT3_1/1136_7L-N1-BDNA-1_A237CFYLT3_1.deconflicted_germline_custom.ann_snpEff.ann.vcf.gz | Jun 05, 2026 4:21 PM |