.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (1136_814-N1-BDNA-1_A237CFYLT3_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/2bd8395450906fd41c08121a9ffef6/.command.log
Size: 620 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (1136_814-N1-BDNA-1_A237CFYLT3_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/d15afe307bd60ac1fe868bf84d11b0/1136_814-N1-BDNA-1_A237CFYLT3_1.chip.normalized.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/2bd8395450906fd41c08121a9ffef6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/2bd8395450906fd41c08121a9ffef6/.command.sh
==> STAGING COMPLETE (3 inputs)

Writing to .Jee8oi
Merging 1 temporary files
Cleaning
Done
ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory