.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_TMB:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1;tnseq)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/da720dd6ae99eeed2e8281891408d6/.command.log
Size: 501 bytes
Task: NFCORE_SAREK:SAREK:VCF_TMB:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1;tnseq)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/1130fc99c18a9ca700d6ce34de4cf3/FFPE_HD789_01_p2_gDNA_03_A23WGJTLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.tnseq.filtered_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/da720dd6ae99eeed2e8281891408d6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/da720dd6ae99eeed2e8281891408d6/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory