NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (869_XA6-T1-TDNA-1_A23WGJTLT4_1) - sarek-cgp-dna-exp0034-tools-20260605-212233 - Workflow Tracker

Runs
sarek-cgp-dn..0605-212233
Tasks
SAMTOOLS_STATS (869_XA6-T1-TDNA-1_A23WGJTLT4_1)

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Task Info

Status: succeeded
Hash: e2a1ec1642d8
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: 869_XA6-T1-TDNA-1_A23WGJTLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 31/3bfb4c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/3bfb4cd995b3a58beceb414ef5e278
Native ID: nf-313bfb4cd995b3a58beceb414ef5e278-e6e54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 2
Memory (peak / alloc): 11.5 MB / 8.0 GB
Process I/O (rchar / wchar): 135.3 GB / 180.7 KB
Disk I/O (read / write): 135.3 GB / 180.0 KB
Host: i-07c8a1ca5ed96c7bc ( on-demand)

Runtime

Submitted: Jun 05, 2026 2:33:22 PM
Completed: Jun 05, 2026 3:37:19 PM
Total Duration: 1h 3m

Phases

Queue: -1s
Execution: 56m 19s
Stage/Unstage: 7m 38s

Attempt 1

Execution

Status: failed
Hash: de/2b3ce1
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/2b3ce1d971d367af7f36e564091fe2
Native ID: nf-de2b3ce1d971d367af7f36e564091fe2-df878

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 4.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08c8197dedc5b844e ( spot)

Runtime

Submitted: Jun 05, 2026 2:25:35 PM
Completed: Jun 05, 2026 2:33:22 PM
Total Duration: 7m 46s

Phases

Queue: 7m 46s
Execution: -
Stage/Unstage: -