.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_XA6-N1-BDNA-1_A23FG3YLT4_1;tnseq)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/58f43ea602cc5be4e148bf46710fe5/.command.log
Size: 705 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_XA6-N1-BDNA-1_A23FG3YLT4_1;tnseq)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/2fc942f9da0d208fbd640030438222/869_XA6-N1-BDNA-1_A23FG3YLT4_1.survivors.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/58f43ea602cc5be4e148bf46710fe5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/58f43ea602cc5be4e148bf46710fe5/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/2fc942f9da0d208fbd640030438222/869_XA6-N1-BDNA-1_A23FG3YLT4_1.survivors.vcf.gz
==> STAGING COMPLETE (4 inputs)

ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory