Prefix: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/cgp_dna_exp0035/tools__44c19e3d--20260605-213512
| Path | ||
|---|---|---|
| /reports/raw_qc/bcftools/sentieon_haplotyper_rf/1136_85O-N1-BDNA-1_B23KGCJLT4_1/1136_85O-N1-BDNA-1_B23KGCJLT4_1.deconflicted_germline.bcftools_stats.txt | Jun 05, 2026 6:14 PM | |
| /variant_calling/chip_variants/1136_85O-N1-BDNA-1_B23KGCJLT4_1/1136_85O-N1-BDNA-1_B23KGCJLT4_1.chip_report.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/chip_variants/1136_85O-N1-BDNA-1_B23KGCJLT4_1/1136_85O-N1-BDNA-1_B23KGCJLT4_1.chip_report.vcf.gz.tbi | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1136_6I8-N1-BDNA-1_B23MHTGLT4_1/1136_6I8-N1-BDNA-1_B23MHTGLT4_1.deconflicted_somatic.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1136_5WB-N1-BDNA-1_B23KFG5LT4_1/1136_5WB-N1-BDNA-1_B23KFG5LT4_1.deconflicted_somatic.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconflicted_somatic.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/chip_variants/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconflicted_chip.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/sentieon_haplotyper_rf/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconflicted_germline.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1136_85O-N1-BDNA-1_B23KGCJLT4_1/1136_85O-N1-BDNA-1_B23KGCJLT4_1.deconflicted_somatic.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1/FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1.snv_indel.phased.vep.final.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1136_5WB-N1-BDNA-1_B23KFG5LT4_1/1136_5WB-N1-BDNA-1_B23KFG5LT4_1.deconflicted_somatic.vcf.gz.tbi | Jun 05, 2026 6:14 PM | |
| /variant_calling/sentieon_haplotyper_rf/1136_6I8-N1-BDNA-1_B23MHTGLT4_1/1136_6I8-N1-BDNA-1_B23MHTGLT4_1.deconflicted_germline.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/sentieon_haplotyper_rf/1136_5WB-N1-BDNA-1_B23KFG5LT4_1/1136_5WB-N1-BDNA-1_B23KFG5LT4_1.deconflicted_germline.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconflicted_somatic.vcf.gz.tbi | Jun 05, 2026 6:14 PM | |
| /variant_calling/snv_indel/1136_85O-T1-TDNA-1_A23WJ5GLT4_10_vs_1136_85O-N1-BDNA-1_B23KGCJLT4_1/1136_85O-T1-TDNA-1_A23WJ5GLT4_10_vs_1136_85O-N1-BDNA-1_B23KGCJLT4_1.snv_indel.phased.vep.final.vcf.gz | Jun 05, 2026 6:14 PM | |
| /reports/deconfliction/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconfliction_audit.tsv | Jun 05, 2026 6:14 PM | |
| /variant_calling/chip_variants/1136_5WB-N1-BDNA-1_B23KFG5LT4_1/1136_5WB-N1-BDNA-1_B23KFG5LT4_1.deconflicted_chip.vcf.gz | Jun 05, 2026 6:14 PM | |
| /variant_calling/sentieon_haplotyper_rf/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.deconflicted_germline.vcf.gz.tbi | Jun 05, 2026 6:14 PM | |
| /variant_calling/sentieon_haplotyper_rf/1136_5WB-N1-BDNA-1_B23KFG5LT4_1/1136_5WB-N1-BDNA-1_B23KFG5LT4_1.deconflicted_germline.vcf.gz.tbi | Jun 05, 2026 6:14 PM | |
| /variant_calling/chip_variants/1136_6I8-N1-BDNA-1_B23MHTGLT4_1/1136_6I8-N1-BDNA-1_B23MHTGLT4_1.deconflicted_chip.vcf.gz | Jun 05, 2026 6:14 PM |