.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (1136_85O-N1-BDNA-1_B23KGCJLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/a6bf2ed334a1896927f8433156bc99/.command.log
Size: 624 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (1136_85O-N1-BDNA-1_B23KGCJLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/2040fa30ac59c2fc22d6cfa8d87f06/1136_85O-N1-BDNA-1_B23KGCJLT4_1.germline.normalized.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/a6bf2ed334a1896927f8433156bc99/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/a6bf2ed334a1896927f8433156bc99/.command.run
==> STAGING COMPLETE (3 inputs)

Writing to .sYyVfF
Merging 1 temporary files
Cleaning
Done
ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory