.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1;tnseq)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/e978cd0598270b5d01fbfa3e05fea3/.command.log
Size: 709 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1;tnseq)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/cd9259c19a83c3ed92fca1954ec70c/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.survivors.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/e978cd0598270b5d01fbfa3e05fea3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/cd9259c19a83c3ed92fca1954ec70c/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.survivors.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/e978cd0598270b5d01fbfa3e05fea3/.command.run
==> STAGING COMPLETE (4 inputs)

ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory