NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1) - sarek-cgp-dna-exp0035-tools-20260605-213512 - Workflow Tracker

Runs
sarek-cgp-dn..0605-213512
Tasks
MSISENSOR2_MSI (FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1)

Login

Task Info

Status: succeeded
Hash: 4962bbd57c19
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI
Tag: FFPE_HD789_01_p2_gDNA_03_A23WJ5GLT4_1_vs_NA12878_c_0002_gDNA_0005_B23KYWJLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: de/87bcd4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/87bcd43367926fd4b63107db6c9b24
Native ID: nf-de87bcd43367926fd4b63107db6c9b24-0d623

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 2
Memory (peak / alloc): 2.9 GB / 72.0 GB
Process I/O (rchar / wchar): 7.1 GB / 104.2 KB
Disk I/O (read / write): 5.4 GB / 244.0 KB
Host: i-02e61272a86de174c ( on-demand)

Runtime

Submitted: Jun 05, 2026 2:49:32 PM
Completed: Jun 05, 2026 3:05:06 PM
Total Duration: 15m 33s

Phases

Queue: 3s
Execution: 4m 13s
Stage/Unstage: 11m 17s

Attempt 1

Execution

Status: failed
Hash: 94/988e07
Failure Reason: Evicted ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/msisensor2:0.1--hd03093a_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/988e079051b560311d02b19a5dea30
Native ID: nf-94988e079051b560311d02b19a5dea30-bb367

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 36.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-090c9aecbd291ec13 ( spot)

Runtime

Submitted: Jun 05, 2026 2:39:02 PM
Completed: Jun 05, 2026 2:49:32 PM
Total Duration: 10m 30s

Phases

Queue: 10m 30s
Execution: -
Stage/Unstage: -