.command.err - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BTOJ-T1-TDNA-1_A23WJ5GLT4_4_vs_1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1;manta)

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/e7b143d0eebee5ea5f54c3b40eeae5/.command.err
Size: 114 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BTOJ-T1-TDNA-1_A23WJ5GLT4_4_vs_1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1;manta)
Attempt

ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory