succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 4s 3s 0s 0s 0 bytes 89% 117.0 KB 48.7 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 17s 1s 0s 15s 19.1 MB 96% 6.5 MB 203.8 KB 92.0 KB 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1) 17m 15s 5s 17m 0s 9s 538.0 MB 1% 576.9 MB 4.7 MB 0 bytes 27.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (1136_5WB-N1-BDNA-1_B23KFG5LT4_1) 18s 5s 2s 10s 239.2 MB 1270% 880.9 MB 4.1 MB 0 bytes 27.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (1136_6I8-N1-BDNA-1_B23MHTGLT4_1) 14s 1s 2s 10s 188.9 MB 1455% 772.5 MB 3.9 MB 0 bytes 27.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (1136_85O-N1-BDNA-1_B23KGCJLT4_1) 15s 1s 3s 10s 591.3 MB 2375% 1.0 GB 3.8 MB 0 bytes 27.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (NA12878_c_0002_gDNA_0005_B23KYWJLT4_1) 1m 16s 6s 1m 0s 9s 229.5 MB 48% 852.2 MB 4.5 MB 0 bytes 27.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1) 11m 38s 1s 9m 17s 2m 19s 2.0 GB 1157% 111.5 GB 35.8 MB 35.4 GB 724.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (1136_5WB-N1-BDNA-1_B23KFG5LT4_1) 7m 8s 6s 5m 27s 1m 34s 1.2 GB 1161% 82.8 GB 23.3 MB 25.3 GB 712.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (1136_6I8-N1-BDNA-1_B23MHTGLT4_1) 6m 5s 6s 4m 43s 1m 15s 1.0 GB 1155% 72.8 GB 21.1 MB 21.8 GB 709.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (1136_85O-N1-BDNA-1_B23KGCJLT4_1) 6m 22s 6s 4m 54s 1m 21s 1.2 GB 1158% 71.4 GB 20.7 MB 21.3 GB 709.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (NA12878_c_0002_gDNA_0005_B23KYWJLT4_1) 10m 8s 2s 8m 43s 1m 22s 1.6 GB 1146% 80.4 GB 32.7 MB 24.8 GB 721.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1;tnseq) 3s 1s - - 22.1 MB 7918% 135.8 KB 23.5 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1136_5WB-N1-BDNA-1_B23KFG5LT4_1;tnseq) 5s 3s - - 21.7 MB 7756% 136.8 KB 22.0 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1136_6I8-N1-BDNA-1_B23MHTGLT4_1;tnseq) 3s 1s - - 3.1 MB 4185% 128.2 KB 23.2 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (1136_85O-N1-BDNA-1_B23KGCJLT4_1;tnseq) 3s 2s - - 14.8 MB 6822% 131.1 KB 22.9 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (NA12878_c_0002_gDNA_0005_B23KYWJLT4_1;tnseq) 3s 1s - - 20.2 MB 3069% 127.2 KB 23.4 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1) 19s 2s 7s 9s 44.7 MB 286% 3.4 GB 3.5 MB 0 bytes 3.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (1136_5WB-N1-BDNA-1_B23KFG5LT4_1) 19s 2s 7s 9s 31.4 MB 152% 3.4 GB 3.0 MB 0 bytes 3.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (1136_6I8-N1-BDNA-1_B23MHTGLT4_1) 18s 2s 7s 8s 32.3 MB 253% 3.4 GB 2.8 MB 0 bytes 2.9 MB 1
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