NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX (1029_032-N1-BDNA-1_2375WFLT3_s01) - sarek-daq-bams-hla-optitype-8a99ba01 - Workflow Tracker

Runs
sarek-daq-ba..pe-8a99ba01
Tasks
BAM_ESTIMATE_SEX (1029_032-N1-BDNA-1_2375WFLT3_s01)

Login

Task Info

Status: succeeded
Hash: 8a7a60fe40e2
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX
Tag: 1029_032-N1-BDNA-1_2375WFLT3_s01
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ff/441157
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/441157c35240dc4f90039870423b63
Native ID: nf-ff441157c35240dc4f90039870423b63-1e039

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 14.0 MB / 1.0 GB
Process I/O (rchar / wchar): 5.8 MB / 111.0 KB
Disk I/O (read / write): 5.4 MB / 116.0 KB
Host: i-0df7452accd46700c ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:23:42 PM
Completed: Feb 03, 2026 5:25:28 PM
Total Duration: 1m 45s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 3d/c8dce6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/c8dce6420ac030b7aeaec9fc34eca3
Native ID: nf-3dc8dce6420ac030b7aeaec9fc34eca3-7ab70

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 1.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-09ba974db782574fe ( spot)

Runtime

Submitted: Feb 03, 2026 5:21:14 PM
Completed: Feb 03, 2026 5:22:55 PM
Total Duration: -

Phases

Queue: 40s
Execution: -
Stage/Unstage: -