NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX (1029_3OH-N1-BDNA-1_2375WFLT3_s10) - sarek-daq-bams-hla-optitype-8a99ba01 - Workflow Tracker

Runs
sarek-daq-ba..pe-8a99ba01
Tasks
BAM_ESTIMATE_SEX (1029_3OH-N1-BDNA-1_2375WFLT3_s10)

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Task Info

Status: succeeded
Hash: b1ff3de24d18
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX
Tag: 1029_3OH-N1-BDNA-1_2375WFLT3_s10
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: e4/0d53ea
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/0d53eadca9ee2a286f794f9a8fc2e9
Native ID: nf-e40d53eadca9ee2a286f794f9a8fc2e9-1b4ad

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 13.6 MB / 1.0 GB
Process I/O (rchar / wchar): 5.8 MB / 110.8 KB
Disk I/O (read / write): 5.4 MB / 116.0 KB
Host: i-0d5ca0e8bdd99e337 ( on-demand)

Runtime

Submitted: Feb 03, 2026 5:23:42 PM
Completed: Feb 03, 2026 5:25:30 PM
Total Duration: 1m 47s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: fb/331c70
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/331c703d7b5361c63da6c0a40af334
Native ID: nf-fb331c703d7b5361c63da6c0a40af334-60477

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 1.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-040fa3d60f6aae61b ( spot)

Runtime

Submitted: Feb 03, 2026 5:21:29 PM
Completed: Feb 03, 2026 5:22:57 PM
Total Duration: -

Phases

Queue: 27s
Execution: -
Stage/Unstage: -