.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_G9R-T1-TDNA-1_A23TNLVLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/06b6d309ab9f6b977a21d66b413fe2/.command.log
Size: 723 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_G9R-T1-TDNA-1_A23TNLVLT4_1)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0085_A23TNLVLT4__0ce77ad5--20260426-135016/alignments/recalibrated/1029_G9R-T1-TDNA-1_A23TNLVLT4_1/1029_G9R-T1-TDNA-1_A23TNLVLT4_1.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/06b6d309ab9f6b977a21d66b413fe2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/06b6d309ab9f6b977a21d66b413fe2/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260424_LH00519_0085_A23TNLVLT4__0ce77ad5--20260426-135016/alignments/recalibrated/1029_G9R-T1-TDNA-1_A23TNLVLT4_1/1029_G9R-T1-TDNA-1_A23TNLVLT4_1.recalibrated.bam.bai