File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8cc4e0c5b0d602608e618ce53c6c12/.command.log
Size
872 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1136_1VE-T1-TDNA-1_A23GW7HLT4_9)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8cc4e0c5b0d602608e618ce53c6c12/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8cc4e0c5b0d602608e618ce53c6c12/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/1136_1VE-T1-TDNA-1_A23GW7HLT4_9/1136_1VE-T1-TDNA-1_A23GW7HLT4_9.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260304_LH00166_0259_A23GW7HLT4__2cd6b81d--20260306-063013/alignments/recalibrated/1136_1VE-T1-TDNA-1_A23GW7HLT4_9/1136_1VE-T1-TDNA-1_A23GW7HLT4_9.recalibrated.bam.bai
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: 1136_1VE-T1-TDNA-1_A23GW7HLT4_9.recalibrated.bam.bai