.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_MHV-T1-TDNA-1_B23VCMYLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/183819832fc9334544e97f40823a6b/.command.log
Size: 723 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_MHV-T1-TDNA-1_B23VCMYLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/183819832fc9334544e97f40823a6b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/183819832fc9334544e97f40823a6b/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0085_B23VCMYLT4__8afaba2b--20260515-102024/alignments/recalibrated/1029_MHV-T1-TDNA-1_B23VCMYLT4_1/1029_MHV-T1-TDNA-1_B23VCMYLT4_1.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260513_LH00527_0085_B23VCMYLT4__8afaba2b--20260515-102024/alignments/recalibrated/1029_MHV-T1-TDNA-1_B23VCMYLT4_1/1029_MHV-T1-TDNA-1_B23VCMYLT4_1.recalibrated.bam