Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/7a950d4fdebcd535230884a3cef7aa/.command.sh Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0080_B23VCL7LT4__c86dea0e--20260506-132014/alignments/recalibrated/1029_N53-T1-TDNA-1_B23VCL7LT4_1/1029_N53-T1-TDNA-1_B23VCL7LT4_1.recalibrated.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/7a950d4fdebcd535230884a3cef7aa/.command.run Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260504_LH00527_0080_B23VCL7LT4__c86dea0e--20260506-132014/alignments/recalibrated/1029_N53-T1-TDNA-1_B23VCL7LT4_1/1029_N53-T1-TDNA-1_B23VCL7LT4_1.recalibrated.bam ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 1029_N53-T1-TDNA-1_B23VCL7LT4_1.recalibrated.bam.bai