.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/ce986fa11f7fdae06d68a57a2500ff/.command.log
Size: 727 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1)
Attempt

Content

  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1/1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/ce986fa11f7fdae06d68a57a2500ff/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/ce986fa11f7fdae06d68a57a2500ff/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260225_LH00527_0054_A23L5NJLT4__5d8e7d70--20260227-160009/alignments/recalibrated/1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1/1029_BSZ8-T1-TDNA-1_A23L5NJLT4_1.recalibrated.bam.bai