Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/768e05683cb98d77b8a9d04a63c2b2/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/768e05683cb98d77b8a9d04a63c2b2/.command.run Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0049_A235YY7LT3__5d8e7d70--20260228-200337/alignments/recalibrated/1029_BSZ8-N1-BDNA-1_235YY7LT3_1/1029_BSZ8-N1-BDNA-1_235YY7LT3_1.recalibrated.bam Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260203_LH00527_0049_A235YY7LT3__5d8e7d70--20260228-200337/alignments/recalibrated/1029_BSZ8-N1-BDNA-1_235YY7LT3_1/1029_BSZ8-N1-BDNA-1_235YY7LT3_1.recalibrated.bam.bai ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 1029_BSZ8-N1-BDNA-1_235YY7LT3_1.recalibrated.bam.bai