File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/37e6a2d33c45b99c020240f3e27712/.command.log
Size
894 bytes
Task
NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (1029_0NX-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/37e6a2d33c45b99c020240f3e27712/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/37e6a2d33c45b99c020240f3e27712/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/beds/altera_subpanels/hg38/xgen-exome-hyb-panel-v2-targets-hg38_short.mrg.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/1f9c199963be12a6b141c098d488c5/1029_0NX-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1.snv_indel.filtered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/1f9c199963be12a6b141c098d488c5/1029_0NX-T1-TDNA-1_A23TNLVLT4_1_vs_1029_0NX-N1-BDNA-1_235YY7LT3_1.snv_indel.filtered.vcf.gz
==> STAGING COMPLETE (5 inputs)

TMB region size: 34149606 bp (34.15 MB)
Total: 28805, In BED: 9102, PASS: 580, TMB_VARIANT: 334, Score: 9.7805