NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_01F-T1-TDNA-1_B23VCL7LT4_1) - sarek-low-input-study-tools-20260529-041148 - Workflow Tracker

Runs
sarek-low-in..0529-041148
Tasks
SAMTOOLS_STATS (1029_01F-T1-TDNA-1_B23VCL7LT4_1)

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Task Info

Status: succeeded
Hash: 4b08735bad30
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: 1029_01F-T1-TDNA-1_B23VCL7LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 86/d103ba
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/d103ba8db1e7c2c34f4fab08fb82f1
Native ID: nf-86d103ba8db1e7c2c34f4fab08fb82f1-bd175

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 2
Memory (peak / alloc): 11.1 MB / 8.0 GB
Process I/O (rchar / wchar): 114.5 GB / 172.2 KB
Disk I/O (read / write): 114.5 GB / 172.0 KB
Host: i-05de5843e9bfd220a ( on-demand)

Runtime

Submitted: May 28, 2026 10:15:01 PM
Completed: May 28, 2026 11:19:12 PM
Total Duration: 1h 4m

Phases

Queue: 5s
Execution: 56m 31s
Stage/Unstage: 7m 34s

Attempt 1

Execution

Status: failed
Hash: 35/ff218d
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/ff218d53957af95417b8135fa5612b
Native ID: nf-35ff218d53957af95417b8135fa5612b-c9e25

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 4.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-00d7f58d156feca16 ( spot)

Runtime

Submitted: May 28, 2026 9:17:38 PM
Completed: May 28, 2026 9:54:39 PM
Total Duration: 37m 1s

Phases

Queue: 37m 1s
Execution: -
Stage/Unstage: -